User talk:Z8600021: Difference between revisions

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--[[User:Z8600021|Z8600021]] 17:14, 20 February 2012 (EST) LDAP change [[User:S8600021]] to [[User:Z8600021]]


[[Brain Awareness Week 2012]]


NLM [http://openi.nlm.nih.gov/index.php Openi] open image searching at NLM.
[http://medicalsciences.med.unsw.edu.au School of Medical Sciences, UNSW]
==Research==
# Implantation Project (Prof William Ledger)
## [http://www.biorepository.unsw.edu.au Biobank]
## Normal and ectopic implantation
## Gene expression
## [http://www.anif.org.au/aboutnif/nodes/UNSW-Node.html MicroCT] | [http://www.bril.unsw.edu.au/facility.htm BRIL]
# Digitising Embryology
## UNSW collection Stage 22 [[Carnegie_stage_22#Stage_22_Serial_Section_Images|Original Images]] | [[Carnegie_stage_22#High_Resolution_Images|High Resolution Images]] | [[:File:Stage_22_image_009.jpg|Original Pituitary]] | [[:File:Stage_22_image_220.jpg|High Resolution Pituitary]] | [http://www.aperio.com/lifescience/capture Aperio]
## [http://www.naturkundemuseum-berlin.de/en/sammlungen/zoologie/embryologische-sammlung/?Lightversion=1 Berlin collection]
# [http://www.acps.unsw.edu.au Australian Centre for Perinatal Research]
## Collaborative Clinical/Basic Research Projects


<ref name="PMID"><pubmed></pubmed></ref>
==Teaching==
* [[Medicine|Online Medicine]] | Face Development - [[BGD_Lecture_-_Face_and_Ear_Development|Lecture]] | [[BGDB_Practical_-_Face_and_Ear_Development|Practical]] | [[Foundations Quiz]]
* [[Science|Online Science]]
* [[Science_Student_Projects|Online Science Projects]]
* [[Medicine_Student_Projects|Online Medicine Projects]]
* [[Embryology Education]] | [[Medicine_Learning_and_Teaching_Forum_2012_-_Online_Projects|Medicine Learning and Teaching Forum 2012 - Online Projects]] | [[ANAT2341_2011_Students#Quick_Groups_Assessment_-_30_Sep|Individual Contributions]]


==iBook==
* [[Embryology iBooks]]
* Planned Projects
** Kyoto Collection (Prof Kohei Shiota)
** Scanning EM (Prof Kathy Sulik) [[:Category:Scanning_EM|Category:Scanning EM]]
** Ultrasound (Dr Andrew McLennan, Dr Stanley Ng) [[Ultrasound_-_Omphalocele_Movie_1|Example]]


 
{{Carnegie_stages}}
{| class="wikitable collapsible collapsed"
! Yamada S
|-
| [[File:Mark_Hill.jpg|90px|left]]
 
Search term: [http://www.ncbi.nlm.nih.gov/pubmed/?term=Yamada S ''Yamada S'']
 
<pubmed limit=5>Endocrine Embryology</pubmed>
|}
 
 
http://php.med.unsw.edu.au/quizwiki
 
http://wikiapiary.com/wiki/Main_Page


==The Genetics of the Dog==
==The Genetics of the Dog==
Line 66: Line 72:
==Early Human Development==
==Early Human Development==


 
{{#pmid:17304021}}
<pubmed>17304021</pubmed>




Line 82: Line 87:
# [[Book_-_A_Laboratory_Manual_and_Text-book_of_Embryology|A Laboratory Manual and Text-book of Embryology (1918)]] Text to be added and edited.
# [[Book_-_A_Laboratory_Manual_and_Text-book_of_Embryology|A Laboratory Manual and Text-book of Embryology (1918)]] Text to be added and edited.


==10 Most Recent SOMS Papers==
{{10 Most Recent}}


<pubmed limit=10> "School of Medical Sciences"[AD] AND "Australia" [AD] AND "2012"[DP] AND pubstatusppublish </pubmed>


<div id="Mark Hill"></div>
[[File:Mark Hill.jpg|100px]]
==Music==
===My Happiness===
Ball Park Music cover Brisbane music royalty Powderfinger's 'My Happiness' for triple j's Like A Version.


<html5media width="480" height="360">https://www.youtube.com/embed/lwu24GEG4r4</html5media>


<div id="Mark Hill"></div>
[https://youtu.be/lwu24GEG4r4  YouTube]
[[File:Mark Hill.jpg|100px]]
 
===Vampire Again===
 
Marlon Williams
 
<html5media width="480" height="360">https://www.youtube.com/embed/rsQCYvS-RC0</html5media>
 
[https://youtu.be/rsQCYvS-RC0 YouTube]
 
===Who´s Gonna Miss You===
Danny Michel
 
<html5media width="480" height="360">https://www.youtube.com/embed/bzWzYoy2ar8</html5media>
 
[https://youtu.be/bzWzYoy2ar8  YouTube]
 
[https://youtu.be/dGi-GCfA45Q YouTube - Young American]
 
 
==Medicine ILP 2015==
 
* [[User:Z3411956‎]] - protein expression
* [[User:Z3386277‎]] - uterine natural killer cells
 
== Shortcuts ==
 
* [[Special:NewFiles]] - recent images and files (PDF, Word, mov, mp3) added as thumbnails, see also  [[Special:ListFiles|List New Files]]
* [[Templates]] - site templates.
* [[Special:Categories]] - current site category list. [[File:Embryology Categories.doc]]
* [[:Category:Quiz]] | [[ANAT2341 Quiz 09]] - simple quizzes used in some classes.
* [[MediaWiki:Sidebar]] - edit the sidebar.
* [[Special:AllPages]] - as it says, all the pages in this project.
* [[Site Map]] - new site. ([[Site map 2004]] map links to the original internet pages).
* [[Cardiac_Embryology]] - ILP Project.
* [[Font colours]] - table of different font colours available for wiki pages.
* Merlot entry - http://www.merlot.org/merlot/viewMaterial.htm?id=530500
 
'''Google''' -  [http://www.google.com/profiles/111323767938085717695 Profile]
 
'''Twitter''' - https://twitter.com/#!/MarkHill_UNSW
 
==Current Site Links==
 
* embryology https://embryology.med.unsw.edu.au/embryology
* cellbiology [http://php.med.unsw.edu.au/cellbiology/index.php?title=Main_Page http://php.med.unsw.edu.au/cellbiology/index.php?title=Main_Page]
* somswiki [http://php.med.unsw.edu.au/somswiki/index.php?title=Main_Page http://php.med.unsw.edu.au/somswiki/index.php?title=Main_Page]
 
==SOMS Wiki==
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Main_Page Main Page]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=PC2_OGTR_Lab#BioHood_Booking_Calendar BioHood_ Booking Calendar]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Tutorial_SoMS_Communication Tutorial_SoMS_Communication]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Special:AllPages All Pages]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Special:NewFiles New Images and Files]
 
==Cell Biology Wiki==
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Main_Page Main Page]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Special:AllPages All Pages]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Special:NewFiles New Images and Files]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=ANAT3231_References ANAT3231 References]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Course_Timetable ANAT3231 Course Timetable]
 
==Student Online Work==
 
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=ANAT3231_Projects_2009 ANAT3231 Cell Biology Projects 2009]
* [http://php.med.unsw.edu.au/embryology/index.php?title=ANAT2341_2009_Students ANAT2341 Embryology Projects 2009]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Independent_Learning_Projects Independent Learning Projects] | [http://php.med.unsw.edu.au/cellbiology/index.php?title=ILP_z3212774 ILP Cardiac Embryology Background] | [[Cardiac_Embryology|Cardiac Embryology Project]] | [http://php.med.unsw.edu.au/cellbiology/index.php?title=ILP_z3221319 Neural Project] | [http://php.med.unsw.edu.au/cellbiology/index.php?title=Delirium_Catalogue Delirium Catalogue]
 
==Collaborative Online Work==
 
* [[Talk:2009_Lab_10|Embryology 10 Stem Cells Lab - Antonio Lee]]
* [[Talk:2009_Lab_7|Embryology 7 Muscle Lab - Steve Palmer]]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=2009_Lab_6 Cell Biology Lab - Cytoskeletal Exercise - Thomas Fath]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Anatomy_2009_AE_Practical_Classes Anatomy 2009 AE Practical Classes - Ken Ashwell]
* [[Cardiac_Embryology|Cardiac Embryology - 2009 ILP Project]]
 
==myGRN: a database and visualisation system for the storage and analysis of developmental genetic regulatory networks==
* [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2702357/?tool=pmcentrez myGRN: a database and visualisation system for the storage and analysis of developmental genetic regulatory networks]
 
==Learning How to Use==
===Text===
* [[Editing Basics|Embryology Editing Basics]]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Editing_Basics Cell Biology Editing Basics]
* [http://php.med.unsw.edu.au/cellbiology/images/3/30/Wiki-refcard.pdf Wiki 1 page Refcard PDF]
* [http://www.openoffice.org/ Open Office] is a free office suite that includes a word processor that can export documents in Wiki format.  [[Using Open Office]]
* [http://meta.wikimedia.org/wiki/Help:Contents#For_editors Help for editors]
 
===Images===
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Cell_Biology_Image_Tutorial Cell Biology Image Tutorial] | [http://en.wikipedia.org/wiki/Image_tutorial Wiki Image Tutorial]
 
===Tables===
* Online [http://devblog.cloudsync.com/examples/wikiTableGenerator Generate Mediawiki table code].
 
===References===
* See also the information about [[ANAT2341_References|reference sources]] and reuse.
 
== Mediawiki ==
[http://www.mediawiki.org/wiki/Extension_Matrix Extension Matrix] The Extension Matrix provides an overview of the extensions available to be added on this site.
 
===Extensions implemented===
* [http://www.mediawiki.org/wiki/Extension:LDAP_Authentication LDAP Authentication] Mac/PC tested OK
* [http://www.mediawiki.org/wiki/Extension:Quiz Quiz] Mac/PC tested OK
* [http://www.mediawiki.org/wiki/Extension:CategoryTree CategoryTree] Mac/PC tested OK
* [http://www.mediawiki.org/wiki/Extension:Quicktime Quicktime] Mac/PC tested OK; Browser problem - Safari, Firefox tested OK, IE width height does not format correctly.
 
 
==Extensions - under test==
* [http://www.mediawiki.org/wiki/Extension:EasyTimeline EasyTimeline] http://en.wikipedia.org/wiki/Template:Early_evolution_of_the_light_bulb
 
* [http://www.mediawiki.org/wiki/Extension:WikiArticleFeeds Extension:WikiArticleFeeds]
** The WikiArticleFeeds Extension is a MediaWiki extension for converting regular wiki articles into RSS and Atom feeds. Note: This is pretty much the polar opposite of XFeed
* [http://www.mediawiki.org/wiki/Extension:XFeed_-_RSS_Feed_Aggregator Extension:XFeed - RSS Feed Aggregator]
** Allow adding of RSS feeds to Wiki page. could use for journals which feed new articles.
* [http://www.mediawiki.org/wiki/Extension:Cite Cite]
* [http://www.mediawiki.org/wiki/Extension:ProcessCite ProcessCite] Installed earlier, but problem with PubMed access, need to have some proxy to work. Contacted extension writer who did not resolve issue. Would like to get this working for referencing to work off PMID. --[[User:S8600021|Mark Hill]] 10:17, 2 September 2009 (EST)
* [http://www.mediawiki.org/wiki/Extension:Calendar_(Barrylb) Calendar] - installed here, but not currently used. Active on SOMS Wiki for biohood booking.
* [http://www.mediawiki.org/wiki/Extension:Hierarchical_Namespace_Permissions Extension:Hierarchical Namespace Permissions]
* RSS, RSSNews need to set up additional extension
* Flash Video play (FLV) using flowplayer. Installed but not configured correctly. --[[User:S8600021|Mark Hill]] 08:17, 2 October 2009 (EST)
* PDFwriter - to generate hardcopy compilations of course lecture notes.
 
* http://usability.wikimedia.org/wiki/Multimedia:Upload_wizard
 
===Making anchors===
Anchors can be placed anywhere on a wiki page and act as a location that a link can jump to.
 
<nowiki><div id="anchor name"></div></nowiki>
 
===Attribute Reference===
* width=px or % (Modify the width of the object)
* height=px or a% (Modify the height of the object)
* autoplay=true/false (Start playing the file or wait at first frame, default:true)
* controller=true/false (Show the controller, default:true)
* name (object-specific)
* id (embed-specific)
* src (embed-specific)
 
Background Reading
* http://digitalmedia.oreilly.com/2006/09/29/two-slick-quicktime-tricks.html?page=2
* http://www.oreillynet.com/pub/a/oreilly/digitalmedia/2007/07/16/quicktime-web-movie-secrets.html
* http://www.appleinsider.com/articles/09/07/06/ogg_theora_h_264_and_the_html_5_browser_squabble.html
 
==Referencing==
There are several referencing solutions and I like the PMID link version as it requires no student formatting. I would also like a local copy of some key references, in particular for recent findings sections of notes, with its own page based on PMID and then we have the whole PMC ID issue. 
 
Annotation of the reference?
 
[http://www.ncbi.nlm.nih.gov/pubmed/ Pubmed] | [http://www.ncbi.nlm.nih.gov/sites/entrez?db=PMC&itool=toolbar PMC]
 
Extensions: [http://www.mediawiki.org/wiki/Extension:Cite Cite] | [http://www.mediawiki.org/wiki/Extension:ProcessCite ProcessCite]
 
==text into speech==


==Stuff==
WebAnywhere is a screen reader converting text into speech
http://webanywhere.cs.washington.edu/wa.php


http://www.wordle.net
==Music==


Monoprice MHP-839 Premium Hi-Fi DJ Style Over-the-Ear Pro Headphone, Black
* [https://open.spotify.com/user/nytimes/playlist/2YY3rAwm9tldNhlBmuMqgY?si=ZVby4PALQ0qM0eZqegL3HA Spotify - The Kajitsu Playlist]

Latest revision as of 16:16, 22 January 2019


School of Medical Sciences, UNSW

Research

  1. Implantation Project (Prof William Ledger)
    1. Biobank
    2. Normal and ectopic implantation
    3. Gene expression
    4. MicroCT | BRIL
  2. Digitising Embryology
    1. UNSW collection Stage 22 Original Images | High Resolution Images | Original Pituitary | High Resolution Pituitary | Aperio
    2. Berlin collection
  3. Australian Centre for Perinatal Research
    1. Collaborative Clinical/Basic Research Projects

Teaching

iBook

Carnegie Stages: 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | About Stages | Timeline

The Genetics of the Dog

The Genetics of the Dog

Edited by E Ostrander, National Human Genome Research Institute (NHGRI), USA, A Ruvinsky, Professor of Genetics, University of New England, Australia

CABI Publishing / March 2012 / Hardback / 536 Pages / ISBN 9781845939403 / ISBN 10: 1845939409

Chapter 15 Developmental Genetics Anatoly Ruvinsky and Mark Hill pp 321-358

Main Description

Recognizing the significant advances made in the field of animal genetics in the ten years since the first edition of Genetics of the Dog, this new edition of the successful 2001 book provides a comprehensive update on the subject, along with new material on topics of current and growing interest. Existing chapters on essential topics such as immunogenetics, genetics of diseases, developmental genetics and the genetics of behaviour have been fully updated, while new authors report on the latest advances in areas such as genetic diversity of dog breeds, canine genomics, olfactory genetics and cancer genetics.

Audience: College/higher education , Professional and scholarly , Professional & Vocational , A / AS level , Further / Higher Education

http://bookshop.cabi.org/?page=2633&pid=2444&site=191

1. Canid phylogeny and the origin of the domestic dog; 2. Experimental studies of early canid domestication; 3. Genetic diversity and phylogenetic relationships of dog breeds; 4. Molecular genetics of coat colour, texture and length; 5. Mendelian traits in the dog; 6. Immunogenetics; 7. Genetic aspects of orthopaedic disorders in the dog; 8. Genetics of cancer in dogs; 9. Genetics of neurological disease in the dog; 10. Genetics of eye disorders in the dog; 11. Cytogenetics and chromosome maps; 12. Canine genomics; 13. Genetics of canine behavioural disorders; 14. Biology of reproduction and modern reproductive technology; 15. Developmental genetics; 16. Genetics of morphological traits; 17. Olfactory genetics; 18. Pedigree analysis, genotype testing and genetic counselling; 19. Genetics of quantitative traits and improvement of dog breeds; 20. Complex traits; 21. Canine model in medical genetics; 22. Genetic aspects of performance in working dogs; 23. Genetic nomenclature.

Comprehensive Handbook of Pediatric Audiology

Edited by: Richard Seewald, PhD, Anne Marie Tharpe, PhD

DETAILS 852 pages, Illustrated (B/W), Hardcover, 8.5 x 11" N/A ISBN10: 1-59756-245-9 ISBN13: 978-1-59756-245-4

http://www.pluralpublishing.com/publication_chpa.htm

http://books.google.com.au/books?id=f_OKPQAACAAJ&dq=isbn:1597562459&hl=en&sa=X&ei=hPv8T7i2KqPnmAXR-9mjBQ&redir_esc=y

2010 - 833 pages - No preview

The Comprehensive Handbook of Pediatric Audiology is the most wide-ranging and complete work of its kind in the specialty area of pediatric audiology. It covers knowledge areas and the literature requisite to the provision of the full range of quality, comprehensive pediatric audiologic services to children from the neonatal period through school-age. The Comprehensive Handbook of Pediatric Audiology will become the definitive reference in pediatric audiology, containing contributions from 50 internationally recognized experts in the field. The Comprehensive Handbook of Pediatric Audiology is intended for use in doctoral-level education programs in audiology or hearing science, as well as to serve as an in-depth reference source for practicing audiologists and other professionals, educators, scientists, and policy makers seeking current and definitive information on evidence-based pediatric audiology practice.


  • Chapter 1 Hearing Development: Embryology of the Ear (Mark Hill)

Early Human Development

Hill MA. (2007). Early human development. Clin Obstet Gynecol , 50, 2-9. PMID: 17304021 DOI.


Historic Embryology - To Do

  1. The Embryology Anatomy and Histology of the Eye (1906) Text requires correction and Anatomy and Histology images still need to be added.
  2. Manual of Human Embryology (1910) Images still need to be added.
  3. A Laboratory Manual and Text-book of Embryology (1918) Text to be added and edited.


Mark Hill.jpg

Music

My Happiness

Ball Park Music cover Brisbane music royalty Powderfinger's 'My Happiness' for triple j's Like A Version.

<html5media width="480" height="360">https://www.youtube.com/embed/lwu24GEG4r4</html5media>

YouTube

Vampire Again

Marlon Williams

<html5media width="480" height="360">https://www.youtube.com/embed/rsQCYvS-RC0</html5media>

YouTube

Who´s Gonna Miss You

Danny Michel

<html5media width="480" height="360">https://www.youtube.com/embed/bzWzYoy2ar8</html5media>

YouTube

YouTube - Young American


Medicine ILP 2015

Shortcuts

Google - Profile

Twitter - https://twitter.com/#!/MarkHill_UNSW

Current Site Links

SOMS Wiki

Cell Biology Wiki

Student Online Work

Collaborative Online Work

myGRN: a database and visualisation system for the storage and analysis of developmental genetic regulatory networks

Learning How to Use

Text

Images

Tables

References

Mediawiki

Extension Matrix The Extension Matrix provides an overview of the extensions available to be added on this site.

Extensions implemented


Extensions - under test

  • Extension:WikiArticleFeeds
    • The WikiArticleFeeds Extension is a MediaWiki extension for converting regular wiki articles into RSS and Atom feeds. Note: This is pretty much the polar opposite of XFeed
  • Extension:XFeed - RSS Feed Aggregator
    • Allow adding of RSS feeds to Wiki page. could use for journals which feed new articles.
  • Cite
  • ProcessCite Installed earlier, but problem with PubMed access, need to have some proxy to work. Contacted extension writer who did not resolve issue. Would like to get this working for referencing to work off PMID. --Mark Hill 10:17, 2 September 2009 (EST)
  • Calendar - installed here, but not currently used. Active on SOMS Wiki for biohood booking.
  • Extension:Hierarchical Namespace Permissions
  • RSS, RSSNews need to set up additional extension
  • Flash Video play (FLV) using flowplayer. Installed but not configured correctly. --Mark Hill 08:17, 2 October 2009 (EST)
  • PDFwriter - to generate hardcopy compilations of course lecture notes.

Making anchors

Anchors can be placed anywhere on a wiki page and act as a location that a link can jump to.

<div id="anchor name"></div>

Attribute Reference

  • width=px or % (Modify the width of the object)
  • height=px or a% (Modify the height of the object)
  • autoplay=true/false (Start playing the file or wait at first frame, default:true)
  • controller=true/false (Show the controller, default:true)
  • name (object-specific)
  • id (embed-specific)
  • src (embed-specific)

Background Reading

Referencing

There are several referencing solutions and I like the PMID link version as it requires no student formatting. I would also like a local copy of some key references, in particular for recent findings sections of notes, with its own page based on PMID and then we have the whole PMC ID issue.

Annotation of the reference?

Pubmed | PMC

Extensions: Cite | ProcessCite

text into speech

WebAnywhere is a screen reader converting text into speech http://webanywhere.cs.washington.edu/wa.php

Music