User:S8600021: Difference between revisions

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This page is used to demonstrate online work to students and currently contains no useful information.
{|
| [[File:Mark_Hill.jpg]]
|


You can format your text using wiki markup. This consists of normal characters like asterisks, single quotes or equation marks which have a special function in the wiki, sometimes depending on their position. For example, to format a word in ''italic'', you include it in two single quotes like <code><nowiki>''this''</nowiki></code>.
School of Medical Sciences, Faculty of Medicine, The University of New South Wales, Sydney 2052 AUSTRALIA


== Text formatting markup ==
E: m.hill@unsw.edu.au
 
* Course Coordinator  - [[ANAT2341_Embryology_2009|ANAT2341 Embryology]], [http://php.med.unsw.edu.au/cellbiology/index.php?title=ANAT3231_Cell_Biology ANAT3231 Cell Biology], [[Medicine|Medicine - BGD Embryology]]
* Designer and coordinator - [[Main Page]] | [http://embryology.med.unsw.edu.au/ original UNSW Embryology website]
 
 
 
[http://medicalsciences.med.unsw.edu.au/SOMSWeb.nsf/page/home School of Medical Sciences] | [http://www.med.unsw.edu.au/ Faculty of Medicine] | [http://www.unsw.edu.au/ The University of New South Wales]


{| class="wikitable"
! Description !! You type !! You get
|-
! colspan="3" style="background:#ABE" | character (inline) formatting – ''applies anywhere''
|-
|Italic text
| <code><nowiki>''italic''</nowiki></code>
|''italic''
|-
| Bold text
| <code><nowiki>'''bold'''</nowiki></code>
|'''bold'''
|-
| Bold and italic
| <code><nowiki>'''''bold & italic'''''</nowiki></code>
|'''''bold & italic'''''
|-
|Escape wiki markup
| <code><nowiki><nowiki>no ''markup''&lt;/nowiki></nowiki></code>
|<nowiki>no ''markup''</nowiki>
|-
! colspan="3" style="background:#ABE" | section formatting – ''only at the beginning of the line''
|-
|Headings of different levels
| <pre>=level 1=
==level 2==
===level 3===
====level 4====
=====level 5=====
======level 6======</pre>
An article with 4 or more headings automatically creates a [[wikipedia:Wikipedia:Section#Table of contents (TOC)|table of contents]].


|<!-- hack to prevent TOC viewing for h1 - h6 elements: their style is hardcopied here -->
'''Google Maps'''- [http://maps.google.com/maps?f=q&source=s_q&hl=en&geocode=&q=Wallace+wurth+building+UNSW&sll=-33.90499,151.233416&sspn=0.016491,0.019312&ie=UTF8&ll=-33.916721,151.235631&spn=0.004122,0.004828&t=h&z=18&iwloc=A UNSW SOMS Wallace Wurth Building]
<div style="font-size: 188%; margin: 0; padding-top: .5em; padding-bottom: .17em; border-bottom: 1px solid #aaa">Level 1</div>
<div style="font-size: 150%; margin: 0; padding-top: .5em; padding-bottom: .17em; border-bottom: 1px solid #aaa">Level 2</div>
<div style="font-size: 132%; font-weight: bold">Level 3</div><!--
--><b>Level 4</b><!--
--><div style="font-size: 86%; font-weight: bold">Level 5</div><!--
--><b style="font-size: 80%">Level 6</b>
|-
|Horizontal rule
| <code>----</code>
|
----
|-
|Bullet list
|
<pre>
* one
* two
* three
** three point one
** three point two
</pre>
Inserting a blank line will end the first list and start another.
|
* one
* two
* three
** three point one
** three point two
|-
|-
|Numbered list
| <center>'''Dr Mark Hill'''</center>
|
|
<pre>
# one
# two<br />spanning more lines<br />doesn't break numbering
# three
## three point one
## three point two
</pre>
|
# one
# two<br />spanning more lines<br />doesn't break numbering
# three
## three point one
## three point two
|-
|Definition list
|<pre>
;item 1
: definition 1
;item 2
: definition 2-1
: definition 2-2
</pre>
|
;item 1
: definition 1
;item 2
: definition 2-1
: definition 2-2
|-
| Adopting definition list to indent text
|
<pre>: Single indent
:: Double indent
::::: Multiple indent</pre>
This workaround may be controversial from the viewpoint of accessibility.
|
: Single indent
:: Double indent
::::: Multiple indent
|-
| Mixture of different types of list
|
<pre>
# one
# two
#* two point one
#* two point two
# three
#; three item one
#: three def one
# four
#: four def one
#: this rather looks like the continuation of # four
#: and thus often used instead of <br />
# five
## five sub 1
### five sub 1 sub 1
## five sub 2


;item 1
:* definition 1-1
:* definition 1-2
:
;item 2
:# definition 2-1
:# definition 2-2
</pre>
The usage of <code>#:</code> and <code>*:</code> for breaking a line within an item may also be controversial.
|
# one
# two
#* two point one
#* two point two
# three
#; three item one
#: three def one
# four
#: four def one
#: this rather looks like the continuation of <code># four</code>
#: often used instead of <code>&lt;br /></code>
# five
## five sub 1
### five sub 1 sub 1
## five sub 2
;item 1
:* definition 1-1
:* definition 1-2
:
;item 2
:# definition 2-1
:# definition 2-2
|-
|-
|Preformatted text
|
<pre>
preformatted text is done with
a '''space''' at the
''beginning'' of the line
</pre>
This way of preformatting only applies to section formatting, and character formatting markups are still effective.
|
preformatted text is done with
a '''space''' at the
''beginning'' of the line
|}
|}


== Paragraphs ==
MediaWiki ignores single line breaks. To start a new paragraph, leave an empty line. You can force a line break within a paragraph with the HTML tags <code>&lt;br /></code>.


== HTML ==
== Shortcuts ==
Some [[wikipedia:HTML|HTML]] tags are allowed in MediaWiki, for example <code>&lt;code></code>, <code>&lt;div></code>, <code><nowiki><span></nowiki></code> and <code><nowiki><font></nowiki></code>. These apply anywhere you insert them.
* [[Wiki setup]] - page to place background information about how the current site has been set up and operates.
* [[Special:NewFiles]] - recent images and files (PDF, Word, mov, mp3) added as thumbnails, see also  [[Special:ListFiles|List New Files]]
* [[Templates]] - site templates.
* [[Special:Categories]] - current site category list. [[File:Embryology Categories.doc]]
* [[:Category:Quiz]] | [[ANAT2341 Quiz 09]] - simple quizzes used in some classes.
* [[MediaWiki:Sidebar]] - edit the sidebar.
* [[Special:AllPages]] - as it says, all the pages in this project.
* [[Site Map]] - new site. ([[Site map 2004]] map links to the original internet pages).
* [[Cardiac_Embryology]] - ILP Project.
* [[Font colours]] - table of different font colours available for wiki pages.


{| class="wikitable"
!Description
!You type
!You get
|-
| Strikethrough
| <code>&lt;del>Strikethrough&lt;/del></code> or <code>&lt;s>Strikethrough&lt;/s></code>
|<del>Strikethrough</del>
|- style="white-space:nowrap"
|Fixed width text
| <code>&lt;tt>Fixed width text&lt;/tt></code> or <code>&lt;code>source code&lt;/code></code>
| <tt>Fixed width text</tt> or <code>source code</code>
|-
|Blockquotes
| <code>
text text text text text text text text text text text text
text text text text text text text text text text text text
&lt;blockquote>  quote quote quote quote quote quote &lt;/blockquote>
text text text text text text text text text text text text
</code>
| text text text text text text text text text text text text text text text text text text text text text text text text <blockquote>  quote quote quote quote quote quote </blockquote> text text text text text text text text text text text text
|-
|Comment
| <code>&lt;!-- This is a comment --></code>
Text can only be viewed in the edit window.
|
<!-- This is a real invisible comment -->
|-
|Completely preformatted text
|
<code><nowiki><pre>this way, all markups are '''ignored'''</pre></nowiki></code>
|
<pre> this way, all markups are '''ignored'''.</pre>
|-
|'''Customized''' preformatted text
|
<code><nowiki><pre style="CSS text">this way, all markups are '''ignored''' and formatted with a CSS text</pre></nowiki></code>
|
<pre style="white-space:pre-wrap;white-space:-moz-pre-wrap;white-space:-pre-wrap;white-space:-o-pre-wrap;word-wrap:break-word;overflow:auto;">
this way for instance, all '''ignored''' markups take into account the navigator size, by automatically adding some carriage returns dynamically to it.</pre>
|}


Admin tip|tip=If you trust your users you can allow full HTML by setting <code>{{mediawiki|Manual:$wgRawHtml|$wgRawHtml}} = true;</code> in {{mediawiki|Manual:LocalSettings.php|LocalSettings.php}}.
'''Google''' - [http://www.google.com/sidewiki/feeds/entries/author/111323767938085717695/default?hl=en Sidewiki Feed] | [http://www.google.com/profiles/111323767938085717695 Profile]
 
==Current Site Links==
 
* embryology [http://embryology.med.unsw.edu.au/embryology/index.php?title=Main_Page http://embryology.med.unsw.edu.au/embryology/index.php?title=Main_Page]
* cellbiology [http://php.med.unsw.edu.au/cellbiology/index.php?title=Main_Page http://php.med.unsw.edu.au/cellbiology/index.php?title=Main_Page]
* somswiki [http://php.med.unsw.edu.au/somswiki/index.php?title=Main_Page http://php.med.unsw.edu.au/somswiki/index.php?title=Main_Page]
 
==SOMS Wiki==
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Main_Page Main Page]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=PC2_OGTR_Lab#BioHood_Booking_Calendar BioHood_ Booking Calendar]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Tutorial_SoMS_Communication Tutorial_SoMS_Communication]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Special:AllPages All Pages]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Special:NewFiles New Images and Files]
 
==Cell Biology Wiki==
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Main_Page Main Page]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Special:AllPages All Pages]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Special:NewFiles New Images and Files]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=ANAT3231_References ANAT3231 References]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Course_Timetable ANAT3231 Course Timetable]
 
==Student Online Work==
 
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=ANAT3231_Projects_2009 ANAT3231 Cell Biology Projects 2009]
* [http://embryology.med.unsw.edu.au/embryology/index.php?title=ANAT2341_2009_Students ANAT2341 Embryology Projects 2009]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Independent_Learning_Projects Independent Learning Projects] | [http://php.med.unsw.edu.au/cellbiology/index.php?title=ILP_z3212774 ILP Cardiac Embryology Background] | [[Cardiac_Embryology|Cardiac Embryology Project]] | [http://php.med.unsw.edu.au/cellbiology/index.php?title=ILP_z3221319 Neural Project] | [http://php.med.unsw.edu.au/cellbiology/index.php?title=Delirium_Catalogue Delirium Catalogue]
 
==Collaborative Online Work==
 
* [[Talk:2009_Lab_10|Embryology 10 Stem Cells Lab - Antonio Lee]]
* [[Talk:2009_Lab_7|Embryology 7 Muscle Lab - Steve Palmer]]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=2009_Lab_6 Cell Biology Lab - Cytoskeletal Exercise - Thomas Fath]
* [http://php.med.unsw.edu.au/somswiki/index.php?title=Anatomy_2009_AE_Practical_Classes Anatomy 2009 AE Practical Classes - Ken Ashwell]
* [[Cardiac_Embryology|Cardiac Embryology - 2009 ILP Project]]
 
==myGRN: a database and visualisation system for the storage and analysis of developmental genetic regulatory networks==
* [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2702357/?tool=pmcentrez myGRN: a database and visualisation system for the storage and analysis of developmental genetic regulatory networks]
 
==Learning How to Use==
===Text===
* [[Editing Basics|Embryology Editing Basics]]
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Editing_Basics Cell Biology Editing Basics]
* [http://php.med.unsw.edu.au/cellbiology/images/3/30/Wiki-refcard.pdf Wiki 1 page Refcard PDF]
* [http://www.openoffice.org/ Open Office] is a free office suite that includes a word processor that can export documents in Wiki format.  [[Using Open Office]]
* [http://meta.wikimedia.org/wiki/Help:Contents#For_editors Help for editors]
 
===Images===
* [http://php.med.unsw.edu.au/cellbiology/index.php?title=Cell_Biology_Image_Tutorial Cell Biology Image Tutorial] | [http://en.wikipedia.org/wiki/Image_tutorial Wiki Image Tutorial]
 
===Tables===
* Online [http://devblog.cloudsync.com/examples/wikiTableGenerator Generate Mediawiki table code].
 
===References===
* See also the information about [[ANAT2341_References|reference sources]] and reuse.
 
== Mediawiki ==
[http://www.mediawiki.org/wiki/Extension_Matrix Extension Matrix] The Extension Matrix provides an overview of the extensions available to be added on this site.
 
===Extensions implemented===
* [http://www.mediawiki.org/wiki/Extension:LDAP_Authentication LDAP Authentication] Mac/PC tested OK
* [http://www.mediawiki.org/wiki/Extension:Quiz Quiz] Mac/PC tested OK
* [http://www.mediawiki.org/wiki/Extension:CategoryTree CategoryTree] Mac/PC tested OK
* [http://www.mediawiki.org/wiki/Extension:Quicktime Quicktime] Mac/PC tested OK; Browser problem - Safari, Firefox tested OK, IE width height does not format correctly.
 
 
==Extensions - under test==
* [http://www.mediawiki.org/wiki/Extension:EasyTimeline EasyTimeline] http://en.wikipedia.org/wiki/Template:Early_evolution_of_the_light_bulb
 
* [http://www.mediawiki.org/wiki/Extension:WikiArticleFeeds Extension:WikiArticleFeeds]
** The WikiArticleFeeds Extension is a MediaWiki extension for converting regular wiki articles into RSS and Atom feeds. Note: This is pretty much the polar opposite of XFeed
* [http://www.mediawiki.org/wiki/Extension:XFeed_-_RSS_Feed_Aggregator Extension:XFeed - RSS Feed Aggregator]
** Allow adding of RSS feeds to Wiki page. could use for journals which feed new articles.
* [http://www.mediawiki.org/wiki/Extension:Cite Cite]
* [http://www.mediawiki.org/wiki/Extension:ProcessCite ProcessCite] Installed earlier, but problem with PubMed access, need to have some proxy to work. Contacted extension writer who did not resolve issue. Would like to get this working for referencing to work off PMID. --[[User:S8600021|Mark Hill]] 10:17, 2 September 2009 (EST)
* [http://www.mediawiki.org/wiki/Extension:Calendar_(Barrylb) Calendar] - installed here, but not currently used. Active on SOMS Wiki for biohood booking.
* [http://www.mediawiki.org/wiki/Extension:Hierarchical_Namespace_Permissions Extension:Hierarchical Namespace Permissions]
* RSS, RSSNews need to set up additional extension
* Flash Video play (FLV) using flowplayer. Installed but not configured correctly. --[[User:S8600021|Mark Hill]] 08:17, 2 October 2009 (EST)
* PDFwriter - to generate hardcopy compilations of course lecture notes.
 
* http://usability.wikimedia.org/wiki/Multimedia:Upload_wizard
 
==Flash==
 
Originally used the Flowplayer extension. Did not seem to be able to place more than one movie on a page with this extension.


== Other formatting ==
Beyond the text formatting markup shown above, here are some other formatting references:


*[[Help:Links|Links]]
Now testing the MediaWiki FLV Player. http://paulgu.com/wiki/FLV_Player
* [[Help:Images|Images]]
* [[Help:Tables|Tables]]


The following are default parameters, they can be overwritten through syntax <wikiflv></wikiflv>.


whatever.flv|whatever.png
width="320"
height="180"
position="none"
autostart="true"
logo="true"
autostart="false"
volume="100"
repeat="false"


==Quicktime==
http://www.mediawiki.org/wiki/Extension:Quicktime


Unfortunately will not work on all platforms. I have used Flash instead until a movie format compatible with all platforms is found.


Size/Width attributes don't hold up in Internet Explorer (6 or 7); Video doesn't play-on-click in Google Chrome


==FLV Video==
<qt>file=Male_gonad_2.mov|width=276px|height=500px|controller=true|autoplay=false</qt>
There should be a FLV Video below? I think I still need to configure and install Flowplayer correctly.


===Attribute Reference===
* width=px or % (Modify the width of the object)
* height=px or a% (Modify the height of the object)
* autoplay=true/false (Start playing the file or wait at first frame, default:true)
* controller=true/false (Show the controller, default:true)
* name (object-specific)
* id (embed-specific)
* src (embed-specific)


<Flowplayer height="540" width="720" autoplay="true">Folding animation 001.flv</Flowplayer>
Background Reading
* http://digitalmedia.oreilly.com/2006/09/29/two-slick-quicktime-tricks.html?page=2
* http://www.oreillynet.com/pub/a/oreilly/digitalmedia/2007/07/16/quicktime-web-movie-secrets.html
* http://www.appleinsider.com/articles/09/07/06/ogg_theora_h_264_and_the_html_5_browser_squabble.html


== A new page ==
==Referencing==
===This is a sub-heading===
There are several referencing solutions and I like the PMID link version as it requires no student formatting. I would also like a local copy of some key references, in particular for recent findings sections of notes, with its own page based on PMID and then we have the whole PMC ID issue. 
'''this is bold''' ''this is italic''
the text will be on same line


the text will be on a different line
Annotation of the reference?
* bullet points
* bullet points
* bullet points


[http://www.ncbi.nlm.nih.gov/pubmed/ Pubmed] | [http://www.ncbi.nlm.nih.gov/sites/entrez?db=PMC&itool=toolbar PMC]


# numbered list
Extensions: [http://www.mediawiki.org/wiki/Extension:Cite Cite] | [http://www.mediawiki.org/wiki/Extension:ProcessCite ProcessCite]
# numbered list
# numbered list


{{Template:Glossary}}


[[File:Sunset.jpg|300px|center]]
{{Template:Footer}}

Latest revision as of 15:31, 12 August 2010

Mark Hill.jpg

School of Medical Sciences, Faculty of Medicine, The University of New South Wales, Sydney 2052 AUSTRALIA

E: m.hill@unsw.edu.au


School of Medical Sciences | Faculty of Medicine | The University of New South Wales


Google Maps- UNSW SOMS Wallace Wurth Building

Dr Mark Hill


Shortcuts


Google - Sidewiki Feed | Profile

Current Site Links

SOMS Wiki

Cell Biology Wiki

Student Online Work

Collaborative Online Work

myGRN: a database and visualisation system for the storage and analysis of developmental genetic regulatory networks

Learning How to Use

Text

Images

Tables

References

Mediawiki

Extension Matrix The Extension Matrix provides an overview of the extensions available to be added on this site.

Extensions implemented


Extensions - under test

  • Extension:WikiArticleFeeds
    • The WikiArticleFeeds Extension is a MediaWiki extension for converting regular wiki articles into RSS and Atom feeds. Note: This is pretty much the polar opposite of XFeed
  • Extension:XFeed - RSS Feed Aggregator
    • Allow adding of RSS feeds to Wiki page. could use for journals which feed new articles.
  • Cite
  • ProcessCite Installed earlier, but problem with PubMed access, need to have some proxy to work. Contacted extension writer who did not resolve issue. Would like to get this working for referencing to work off PMID. --Mark Hill 10:17, 2 September 2009 (EST)
  • Calendar - installed here, but not currently used. Active on SOMS Wiki for biohood booking.
  • Extension:Hierarchical Namespace Permissions
  • RSS, RSSNews need to set up additional extension
  • Flash Video play (FLV) using flowplayer. Installed but not configured correctly. --Mark Hill 08:17, 2 October 2009 (EST)
  • PDFwriter - to generate hardcopy compilations of course lecture notes.

Flash

Originally used the Flowplayer extension. Did not seem to be able to place more than one movie on a page with this extension.


Now testing the MediaWiki FLV Player. http://paulgu.com/wiki/FLV_Player

The following are default parameters, they can be overwritten through syntax <wikiflv></wikiflv>.

whatever.flv|whatever.png width="320" height="180" position="none" autostart="true" logo="true" autostart="false" volume="100" repeat="false"

Quicktime

http://www.mediawiki.org/wiki/Extension:Quicktime

Unfortunately will not work on all platforms. I have used Flash instead until a movie format compatible with all platforms is found.

Size/Width attributes don't hold up in Internet Explorer (6 or 7); Video doesn't play-on-click in Google Chrome

<qt>file=Male_gonad_2.mov|width=276px|height=500px|controller=true|autoplay=false</qt>

Attribute Reference

  • width=px or % (Modify the width of the object)
  • height=px or a% (Modify the height of the object)
  • autoplay=true/false (Start playing the file or wait at first frame, default:true)
  • controller=true/false (Show the controller, default:true)
  • name (object-specific)
  • id (embed-specific)
  • src (embed-specific)

Background Reading

Referencing

There are several referencing solutions and I like the PMID link version as it requires no student formatting. I would also like a local copy of some key references, in particular for recent findings sections of notes, with its own page based on PMID and then we have the whole PMC ID issue.

Annotation of the reference?

Pubmed | PMC

Extensions: Cite | ProcessCite

Glossary Links

Glossary: A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z | Numbers | Symbols | Term Link

Cite this page: Hill, M.A. (2024, April 18) Embryology S8600021. Retrieved from https://embryology.med.unsw.edu.au/embryology/index.php/User:S8600021

What Links Here?
© Dr Mark Hill 2024, UNSW Embryology ISBN: 978 0 7334 2609 4 - UNSW CRICOS Provider Code No. 00098G
Retrieved from ‘https://embryology.med.unsw.edu.au/embryology/index.php?title=User:S8600021&oldid=31390’
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