OMIM References: Difference between revisions
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Students when referencing specific materials should as much as possible cite the original '''Research article''' and not Review articles. When wanting to give a broad overview or summaries of the field, the Review articles should be cited (and indicated as "reviews"). Students should also avoid direct text cut and paste and if absolutely necessary should place in "quotation marks" citing the original reference. | Students when referencing specific materials should as much as possible cite the original '''Research article''' and not Review articles. When wanting to give a broad overview or summaries of the field, the Review articles should be cited (and indicated as "reviews"). Students should also avoid direct text cut and paste and if absolutely necessary should place in "quotation marks" citing the original reference. | ||
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'''Links:''' [http://www.ncbi.nlm.nih.gov/omim/ OMIM] | [http://www.ncbi.nlm.nih.gov/Omim/omimfaq.html#citing_omim Citing OMIM?] | '''Links:''' [http://www.ncbi.nlm.nih.gov/omim/ OMIM] | [http://www.ncbi.nlm.nih.gov/Omim/omimfaq.html#citing_omim Citing OMIM?] | ||
== 1999 OMIM Pages == | |||
In 1999 I searched the Online Mendelian Inheritence in Man (OMIM) database and selected a small number of references for each topic. These earlier searches are now slightly out of date, but should still be a good starting point for those interested in the topics. | |||
These pages retain the original earlier site (Version 3) page layout. | |||
=== Week 1 === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/102530.htm Acrosome Malformation of Spermatoza] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/week1/182888.htm Zona Pellucida Glycoprotein 2; ZP2] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/week1/182889.htm Zona Pellucida Glycoprotein 3A; ZP3A] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/314670.htm X-inactivation-specific Transcript: Xist] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/601050.htm Zona Pellucida Receptor Tyrosine Kinase, 95-KD; ZRK ] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/week1/fertlist.htm Fertilization- List Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/week1/sperlist.htm Sperm List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/week1/spermot_list.htm Sperm Motility List- Select] | |||
Fertilization | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/102530.htm Acrosome Malformation of Spermatoza] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/182888.htm Zona pellucida Glycoprotein 2; ZP2] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/182889.htm Zona Pellucida Glycoprotein 3A; ZP3A] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/314670.htm X-Inactivation-Specific Transcript; Xist] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/601050.htm Zona Pellucida Receptor Tyrosine Kinase, 95-KD; ZRK] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/fertlist.htm Fertilization List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/sperlist.htm Sperm List-Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/fert/spermot_list.htm Sperm Motility List- Select] | |||
=== Week 2 === | |||
=== Week 3 === | |||
=== Abnormal Development === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/abnorm/103780.htm Fetal Alcohol Syndrome] | |||
=== Neural === | |||
=== Cardiovascular === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/heart/OMIM-tof_list.htm Tetralogy of Fallot List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/heart/OMIM-pda_list.htm Patent Ductus Arteriosus List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/heart/OMIM-heart.htm Heart List-Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/heart/OMIM-asd_list.htm Atrial Septal Defect List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/heart/OMIM-108800.htm Atrial Septal Defect] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/heart/OMIM-169100.htm Patent Ductus Arteriosus] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/heart/OMIM-187500.htm Tetralogy of Fallot] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/heart/OMIM-branchblock.htm Bundle Branch Block] | |||
=== Musculoskeletal === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-128239.htm Dystrophin-Associated Glycoprotein1; DAG1] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-142700.htm Hip, Dislocation of, Congenital] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-185900.htm Syndactyly, Type I] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-186000.htm Syndactyly, Type II] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-186100.htm Syndactyly, Type III] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-186200.htm Syndactyly, Type IV] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-186300.htm Syndactyly, Type V] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-310200.htm Myotonic Dystrophy] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-arthrogryposis_list.htm Arthrogryposis Syndrome List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-dystophy_list.htm Muscular Dystrophy List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-hip_list.htm Congenital Dystrophy List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-scoliosis_list.htm Scoliosis List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/skmus/OMIM-syndactyly_list.htm Syndactly List- Select] | |||
=== Gastrointestinal === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/git/OMIM-142623.htm Hirschsprung Disease] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/git/OMIM-193250.htm Volvulus of Midgut] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/git/OMIM-600155.htm Hirschsprung Disease 2] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/git/OMIM-601346.htm Gastrointestinal Abnormalities Multiple] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/git/OMIM-hs_list.htm Select Entries] | |||
=== Head and Neck === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/head/OMIM-119530.htm Orofacial Cleft 1; OFC1] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/head/OMIM-128600.htm Ear Malformation] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/head/OMIM-172880.htm Pierre Robin Syndrome and Oligodactyly] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/head/OMIM-261800.htm Pierre Robin Syndrome] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/head/OMIM-311900.htm Pierre Robin Syndrome with Congenital Heart Malformation and Clubfoot] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/head/OMIM-cleftlip_list.htm Cleft Lip List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/head/OMIM-prs_list.htm Pierre Robin Syndrome List- Select] | |||
=== Coelomic Cavity === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/coelom/OMIM-dh_list.htm Diaphragmatic Hernia List] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/coelom/OMIM-142340.htm Diaphragmatic Hernia] | |||
=== Respiratory === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/respire/OMIM-lung_list.htm Lung List- Select] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/respire/OMIM-130710.htm Emphysema, Congenital Lobar; CLE] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/respire/OMIM-164280.htm Oculodigitoesophagoduodenal Syndrome] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/respire/OMIM-189960.htm Tracheoesophageal Fistula] | |||
=== Neural Crest === | |||
=== Senses === | |||
=== Urogenital === | |||
Kidney | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/kidney/OMIM-100100.htm Prune Belly Syndrome] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/kidney/OMIM-143400.htm Multicystic Renal Dysplasia] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/kidney/OMIM-173900.htm Polycystic Kidneys] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/kidney/OMIM-191830.htm Urogenital Adysplasia] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/kidney/OMIM-194070.htm Wilms Tumor 1] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/kidney/OMIM-264140.htm Prune Belly Syndrome with Pulmonic Stenosis, Mental Retardation and Deafness] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/kidney/OMIM-600057.htm Exstrophy of Bladder] | |||
Gonad | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/gonad/OMIM-154230.htm Sex Reversal, Autosomal, 2; SRA2] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/gonad/OMIM-219050.htm Cryptorchidism] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/gonad/OMIM-278850.htm XX Male Syndrome] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/gonad/OMIM-306100.htm Gonadal Dysgenesis, XY Female Type; GDXY] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/gonad/OMIM-424500.htm Gonadoblastoma; GBY] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/gonad/OMIM-603737.htm Ovarian Germ Cell Cancer] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/gonad/OMIM-gonadlist.htm Gonad List- Select] | |||
=== Endocrine === | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/endocrine/OMIM-164761.htm Ret Protooncogene] | |||
* [http://embryology.med.unsw.edu.au/OMIMfind/endocrine/OMIM-188400.htm DiGeorge Syndrome] |
Revision as of 10:25, 23 March 2010
Introduction
There are many different Online Mendelian Inheritence in Man (OMIM) reference materials used in UNSW Embryology. Selected OMIM references can also be found on the Abnormalities (page 2) of each section of Notes and there are also search buttons that will perform searches using specific term(s) of external databases. Some search results will allow access to the full original document, while others may require a Journal subscription to access the full document.
Students when referencing specific materials should as much as possible cite the original Research article and not Review articles. When wanting to give a broad overview or summaries of the field, the Review articles should be cited (and indicated as "reviews"). Students should also avoid direct text cut and paste and if absolutely necessary should place in "quotation marks" citing the original reference.
About OMIM "Online Mendelian Inheritance in Man OMIM is a comprehensive, authoritative, and timely compendium of human genes and genetic phenotypes. The full-text, referenced overviews in OMIM contain information on all known mendelian disorders and over 12,000 genes. OMIM focuses on the relationship between phenotype and genotype. It is updated daily, and the entries contain copious links to other genetics resources." OMIM
Links: OMIM | Citing OMIM?
1999 OMIM Pages
In 1999 I searched the Online Mendelian Inheritence in Man (OMIM) database and selected a small number of references for each topic. These earlier searches are now slightly out of date, but should still be a good starting point for those interested in the topics.
These pages retain the original earlier site (Version 3) page layout.
Week 1
- Acrosome Malformation of Spermatoza
- Zona Pellucida Glycoprotein 2; ZP2
- Zona Pellucida Glycoprotein 3A; ZP3A
- X-inactivation-specific Transcript: Xist
- Zona Pellucida Receptor Tyrosine Kinase, 95-KD; ZRK
- Fertilization- List Select
- Sperm List- Select
- Sperm Motility List- Select
Fertilization
- Acrosome Malformation of Spermatoza
- Zona pellucida Glycoprotein 2; ZP2
- Zona Pellucida Glycoprotein 3A; ZP3A
- X-Inactivation-Specific Transcript; Xist
- Zona Pellucida Receptor Tyrosine Kinase, 95-KD; ZRK
- Fertilization List- Select
- Sperm List-Select
- Sperm Motility List- Select
Week 2
Week 3
Abnormal Development
Neural
Cardiovascular
- Tetralogy of Fallot List- Select
- Patent Ductus Arteriosus List- Select
- Heart List-Select
- Atrial Septal Defect List- Select
- Atrial Septal Defect
- Patent Ductus Arteriosus
- Tetralogy of Fallot
- Bundle Branch Block
Musculoskeletal
- Dystrophin-Associated Glycoprotein1; DAG1
- Hip, Dislocation of, Congenital
- Syndactyly, Type I
- Syndactyly, Type II
- Syndactyly, Type III
- Syndactyly, Type IV
- Syndactyly, Type V
- Myotonic Dystrophy
- Arthrogryposis Syndrome List- Select
- Muscular Dystrophy List- Select
- Congenital Dystrophy List- Select
- Scoliosis List- Select
- Syndactly List- Select
Gastrointestinal
- Hirschsprung Disease
- Volvulus of Midgut
- Hirschsprung Disease 2
- Gastrointestinal Abnormalities Multiple
- Select Entries
Head and Neck
- Orofacial Cleft 1; OFC1
- Ear Malformation
- Pierre Robin Syndrome and Oligodactyly
- Pierre Robin Syndrome
- Pierre Robin Syndrome with Congenital Heart Malformation and Clubfoot
- Cleft Lip List- Select
- Pierre Robin Syndrome List- Select
Coelomic Cavity
Respiratory
- Lung List- Select
- Emphysema, Congenital Lobar; CLE
- Oculodigitoesophagoduodenal Syndrome
- Tracheoesophageal Fistula
Neural Crest
Senses
Urogenital
Kidney
- Prune Belly Syndrome
- Multicystic Renal Dysplasia
- Polycystic Kidneys
- Urogenital Adysplasia
- Wilms Tumor 1
- Prune Belly Syndrome with Pulmonic Stenosis, Mental Retardation and Deafness
- Exstrophy of Bladder
Gonad
- Sex Reversal, Autosomal, 2; SRA2
- Cryptorchidism
- XX Male Syndrome
- Gonadal Dysgenesis, XY Female Type; GDXY
- Gonadoblastoma; GBY
- Ovarian Germ Cell Cancer
- Gonad List- Select