File:Sheep follicle gene expression 01.jpg - Revision history

Z8600021: /* Sheep Follicle Gene Expression */

2015-11-12T12:37:31Z

Sheep Follicle Gene Expression

← Older revision		Revision as of 23:37, 12 November 2015
Line 7:		Line 7:

	Follicle type and diameter		Follicle type and diameter
	* primordial (PD) <35 μM		* primordial (PD) < 35 μM
	* primary (PM) 35 – 50 μM		* primary (PM) 35 – 50 μM
	* secondary follicles (SC) 60 – 120 μM		* secondary follicles (SC) 60 – 120 μM

Z8600021: /* Sheep Follicle Gene Expression */

2015-11-12T12:36:36Z

Sheep Follicle Gene Expression

← Older revision		Revision as of 23:36, 12 November 2015
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	* <font color=blue>'''blue'''</font> - genes expressed in oocytes.		* <font color=blue>'''blue'''</font> - genes expressed in oocytes.
	* '''black''' - genes expressed both in oocytes and granulosa cells.		* '''black''' - genes expressed both in oocytes and granulosa cells.

	\| Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG).

	Follicle type and diameter		Follicle type and diameter
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	* secondary follicles (SC) 60 – 120 μM		* secondary follicles (SC) 60 – 120 μM
	* small antral follicles (SA) 250 – 500 μM		* small antral follicles (SA) 250 – 500 μM
			\| Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG).

	They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.		They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.

Z8600021 at 12:36, 12 November 2015

2015-11-12T12:36:09Z

← Older revision		Revision as of 23:36, 12 November 2015
Line 6:		Line 6:
	* '''black''' - genes expressed both in oocytes and granulosa cells.		* '''black''' - genes expressed both in oocytes and granulosa cells.

	\| Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG). They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.		\| Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG).

			Follicle type and diameter
			* primordial (PD) <35 μM
			* primary (PM) 35 – 50 μM
			* secondary follicles (SC) 60 – 120 μM
			* small antral follicles (SA) 250 – 500 μM

			They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.
	\|}		\|}

Z8600021 at 12:22, 12 November 2015

2015-11-12T12:22:12Z

← Older revision		Revision as of 23:22, 12 November 2015
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	\|}		\|}

	:'''Links:''' [[Oocyte Development]] \| [[Sheep Development]]		:'''Links:''' [[Granulosa cell]] \| [[Oocyte Development]] \| [[Sheep Development]]
	===Reference===		===Reference===

Z8600021 at 12:21, 12 November 2015

2015-11-12T12:21:24Z

← Older revision		Revision as of 23:21, 12 November 2015
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	{\|		{\|
	\| width=300px\|		\| width=300px\|
	* =red>'''red'''</font> - genes expressed in granulose cells.		* <font color=red>'''red'''</font> - genes expressed in granulose cells.
	* =blue>'''blue'''</font> - genes expressed in oocytes.		* <font color=blue>'''blue'''</font> - genes expressed in oocytes.
	* '''black''' - genes expressed both in oocytes and granulosa cells.		* '''black''' - genes expressed both in oocytes and granulosa cells.

Z8600021 at 12:20, 12 November 2015

2015-11-12T12:20:46Z

← Older revision		Revision as of 23:20, 12 November 2015
Line 2:		Line 2:
	{\|		{\|
	\| width=300px\|		\| width=300px\|
	* red - genes expressed in granulose cells.		* =red>'''red'''</font> - genes expressed in granulose cells.
	* blue - genes expressed in oocytes.		* =blue>'''blue'''</font> - genes expressed in oocytes.
	* black - genes expressed both in oocytes and granulosa cells.		* '''black''' - genes expressed both in oocytes and granulosa cells.

	\| Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG). They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.		\| Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG). They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.

Z8600021: /* Sheep Follicle Gene Expression */

2015-11-12T12:19:05Z

Sheep Follicle Gene Expression

← Older revision		Revision as of 23:19, 12 November 2015
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	==Sheep Follicle Gene Expression==		==Sheep Follicle Gene Expression==
	{\|		{\|
	\| width=~~200px~~\|		\| width=300px\|
	* red - genes expressed in ~~granulosa~~ cells		* red - genes expressed in granulose cells.
	* blue - genes expressed in oocytes.		* blue - genes expressed in oocytes.
	* black - genes expressed both in oocytes and granulosa cells.		* black - genes expressed both in oocytes and granulosa cells.

Z8600021: /* Sheep Follicle Gene Expression */

2015-11-12T12:18:46Z

Sheep Follicle Gene Expression

← Older revision		Revision as of 23:18, 12 November 2015
Line 1:		Line 1:
	==Sheep Follicle Gene Expression==		==Sheep Follicle Gene Expression==
			{\|
	Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG). They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.		\| width=200px\|

	* red - genes expressed in granulosa cells		* red - genes expressed in granulosa cells
	* blue - genes expressed in oocytes.		* blue - genes expressed in oocytes.
	* black - genes expressed both in oocytes and granulosa cells.		* black - genes expressed both in oocytes and granulosa cells.

			\| Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG). They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.
			\|}

	:'''Links:''' [[Oocyte Development]] \| [[Sheep Development]]		:'''Links:''' [[Oocyte Development]] \| [[Sheep Development]]

Z8600021: /* Sheep Follicle Gene Expression */

2015-11-12T12:18:12Z

Sheep Follicle Gene Expression

← Older revision		Revision as of 23:18, 12 November 2015
Line 6:		Line 6:
	* blue - genes expressed in oocytes.		* blue - genes expressed in oocytes.
	* black - genes expressed both in oocytes and granulosa cells.		* black - genes expressed both in oocytes and granulosa cells.



	:'''Links:''' [[Oocyte Development]] \| [[Sheep Development]]		:'''Links:''' [[Oocyte Development]] \| [[Sheep Development]]

Z8600021: /* Sheep follicle gene expression */

2015-11-12T12:17:59Z

Sheep follicle gene expression

← Older revision		Revision as of 23:17, 12 November 2015
Line 1:		Line 1:
	==Sheep ~~follicle gene expression~~==		==Sheep Follicle Gene Expression==

	Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG). They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR. Gene names marked in red are genes expressed in granulosa cells and gene names marked in blue are genes expressed in oocytes. Gene names marked in black are genes expressed both in oocytes and granulosa cells.		Distribution of the expression of the 24 biomarkers during early follicular development. These biomarkers correspond to the most strongly expressed genes in a specific cell type and stage (PDO, PMO, SCO, SAO, PDG, PMG, SCG, SAG). They were selected using pairwise comparisons (nbinom Test) comparing each stage to the others including multi-tissue samples (FDR<5% and a fold change >3 for granulosa samples and a fold change >-10 for oocyte samples). Their differential expression was confirmed by qRT-PCR.

			* red - genes expressed in granulosa cells
			* blue - genes expressed in oocytes.
			* black - genes expressed both in oocytes and granulosa cells.

			:'''Links:''' [[Oocyte Development]] \| [[Sheep Development]]
	===Reference===		===Reference===