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NiceProt View of SWISS-PROT: P02833

[General] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

General information about the entry

Entry name

HMAN_DROME

Primary accession number

P02833

Secondary accession number(s)

None

Entered in SWISS-PROT in

Release 01, July 1986

Sequence was last modified in

Release 09, November 1988

Annotations were last modified in

Release 39, February 2000

Name and origin of the protein

Protein name

HOMEOTIC ANTENNAPEDIA PROTEIN

Synonym(s)

None

Gene name(s)

ANTP

From

Drosophila melanogaster (Fruit fly)

Taxonomy

Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila.

References

[1]
SEQUENCE FROM N.A.
Schneuwly S., Kuroiwa A., Baumgartner P., Gehring W.J.;
"Structural organization and sequence of the homeotic gene Antennapedia of Drosophila melanogaster.";
EMBO J. 5:733-739(1986).

[2]
SEQUENCE FROM N.A.
MEDLINE; 87089828. [NCBI, ExPASy, Israel, Japan]
Stroeher V.L., Jorgensen E.M., Garber R.L.;
"Multiple transcripts from the Antennapedia gene of Drosophila melanogaster.";
Mol. Cell. Biol. 6:4667-4675(1986).

[3]
SEQUENCE FROM N.A.
Celniker S.E., Pfeiffer B., Knafels J., Martin C.H., Mayeda C.A., Palazzolo M.J.;
"Complete sequence of the Antennapedia complex of Drosophila.";
Submitted (JAN-1999) to the EMBL/GenBank/DDBJ databases.

[4]
SEQUENCE OF 296-378 FROM N.A.
MEDLINE; 84205674. [NCBI, ExPASy, Israel, Japan]
McGinnis W., Garber R.L., Wirz J., Kuroiwa A., Gehring W.J.;
"A homologous protein-coding sequence in Drosophila homeotic genes and its conservation in other metazoans.";
Cell 37:403-408(1984).

[5]
SEQUENCE OF 296-364 FROM N.A.
MEDLINE; 84248068. [NCBI, ExPASy, Israel, Japan]
Scott M.P., Weiner A.J.;
"Structural relationships among genes that control development: sequence homology between the Antennapedia, Ultrabithorax, and fushi tarazu loci of Drosophila.";
Proc. Natl. Acad. Sci. U.S.A. 81:4115-4119(1984).

[6]
SEQUENCE OF 297-357 FROM N.A.
MEDLINE; 86079516. [NCBI, ExPASy, Israel, Japan]
Regulski M., Harding K., Kostriken R., Karch F., Levine M., McGinnis W.;
"Homeo box genes of the Antennapedia and bithorax complexes of Drosophila.";
Cell 43:71-80(1985).

[7]
STRUCTURE BY NMR OF HOMEOBOX.
MEDLINE; 90317820. [NCBI, ExPASy, Israel, Japan]
Billeter M., Qian Y.-Q., Otting G., Mueller M., Gehring W.J., Wuethrich K.;
"Determination of the three-dimensional structure of the Antennapedia homeodomain from Drosophila in solution by 1H nuclear magnetic resonance spectroscopy.";
J. Mol. Biol. 214:183-197(1990).

[8]
STRUCTURE BY NMR OF HOMOEBOX.
MEDLINE; 94087721. [NCBI, ExPASy, Israel, Japan]
Qian Y.-Q., Otting G., Billeter M., Mueller M., Gehring W.J., Wuethrich K.;
"Nuclear magnetic resonance spectroscopy of a DNA complex with the uniformly 13C-labeled Antennapedia homeodomain and structure determination of the DNA-bound homeodomain.";
J. Mol. Biol. 234:1070-1083(1993).

[9]
STRUCTURE BY NMR OF HOMOEBOX.
MEDLINE; 94087722. [NCBI, ExPASy, Israel, Japan]
Billeter M., Qian Y.-Q., Otting G., Mueller M., Gehring W.J., Wuethrich K.;
"Determination of the nuclear magnetic resonance solution structure of an Antennapedia homeodomain-DNA complex.";
J. Mol. Biol. 234:1084-1097(1993).

[10]
STRUCTURE BY NMR OF 279-363.
MEDLINE; 93066318. [NCBI, ExPASy, Israel, Japan]
Qian Y.-Q., Otting G., Furukubo-Tokinaga K., Affolter M., Gehring W.J., Wuethrich K.;
"NMR structure determination reveals that the homeodomain is connected through a flexible linker to the main body in the Drosophila Antennapedia protein.";
Proc. Natl. Acad. Sci. U.S.A. 89:10738-10742(1992).

[11]
X-RAY CRYSTALLOGRAPHY (2.4 ANGSTROMS) OF 297-356.
MEDLINE; 98363212. [NCBI, ExPASy, Israel, Japan]
Fraenkel E., Pabo C.O.;
"Comparison of X-ray and NMR structures for the Antennapedia homeodomain-DNA complex.";
Nat. Struct. Biol. 5:692-697(1998).

Comments

  • FUNCTION: SEQUENCE-SPECIFIC TRANSCRIPTION FACTOR WHICH IS PART OF A DEVELOPMENTAL REGULATORY SYSTEM THAT PROVIDES CELLS WITH SPECIFIC POSITIONAL IDENTITIES ON THE ANTERIOR-POSTERIOR AXIS.
  • FUNCTION: THIS HOMEOTIC PROTEIN CONTROLS DEVELOPMENT OF THE CELLS IN THE MESOTHORAX SEGMENTS.
  • SUBCELLULAR LOCATION: NUCLEAR (PROBABLE).
  • SIMILARITY: BELONGS TO THE ANTP FAMILY OF HOMEOBOX PROTEINS.

Copyright

This SWISS-PROT entry is copyright. It is produced through a collaboration between the Swiss Institute of Bioinformatics and the EMBL outstation - the European Bioinformatics Institute. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://www.isb-sib.ch/announce/ or send an email to license@isb-sib.ch).

Cross-references

EMBL

X03790; CAA27417.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
X03791; CAA27417.1; JOINED. [EMBL / GenBank / DDBJ] [CoDingSequence]
K01948; AAA28373.1; ALT_SEQ. [EMBL / GenBank / DDBJ] [CoDingSequence]
AE001573; AAD19793.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
M14496; AAA28376.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
M20704; AAA70214.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
M20705; AAA70216.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
M12009; AAA79241.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]

PIR

A03318; A03318.
A25399; A25399.
A23450; A23450.
C24780; C24780.
A25400; A25400.

PDB

1HOM; 31-OCT-93. [ExPASy / RCSB]
2HOA; 31-OCT-93. [ExPASy / RCSB]
1AHD; 31-OCT-93. [ExPASy / RCSB]
1SAN; 30-APR-94. [ExPASy / RCSB]
9ANT; 18-NOV-98. [ExPASy / RCSB]

SWISS-3DIMAGE

HMAN_DROME.

TRANSFAC

T00026; -.

FLYBASE

FBgn0000095; Antp.

PFAM

PF00046; homeobox; 1.

PRINTS

PR00024; HOMEOBOX.
PR00025; ANTENNAPEDIA.

PROSITE

PS00027; HOMEOBOX_1; 1.
PS00032; ANTENNAPEDIA; 1.
PS50071; HOMEOBOX_2; 1.

PRODOM

[Domain structure / List of seq. sharing at least 1 domain]

BLOCKS

P02833.

DOMO

P02833.

PROTOMAP

P02833.

PRESAGE

P02833.

SWISS-2DPAGE

GET REGION ON 2D PAGE.

Keywords

Homeobox; DNA-binding; Developmental protein; Nuclear protein; 3D-structure.

Features


DOMAIN       76     81       GLN-RICH (OPA-REPEAT).
                  
DOMAIN 110 155 GLN-RICH (OPA-REPEAT).
DOMAIN 283 288 ANTP-TYPE HEXAPEPTIDE.
DNA_BIND 297 356 HOMEOBOX.
CONFLICT 300 300 G -> E (IN REF. 6).
HELIX 306 318
HELIX 324 334
TURN 335 335
HELIX 339 350
TURN 351 355
TURN 358 359
SEVIEWER logo FT table viewer

Sequence information

Length: 378 AA

Molecular weight: 42761 Da

CRC64: D653232A8622D055 [This is a checksum on the sequence]

        10         20         30         40         50         60 
         |          |          |          |          |          | 
MTMSTNNCES MTSYFTNSYM GADMHHGHYP GNGVTDLDAQ QMHHYSQNAN HQGNMPYPRF
                  
        70         80         90        100        110        120 
         |          |          |          |          |          | 
PPYDRMPYYN GQGMDQQQQH QVYSRPDSPS SQVGGVMPQA QTNGQLGVPQ QQQQQQQQPS
                  
       130        140        150        160        170        180 
         |          |          |          |          |          | 
QNQQQQQAQQ APQQLQQQLP QVTQQVTHPQ QQQQQPVVYA SCKLQAAVGG LGMVPEGGSP
                  
       190        200        210        220        230        240 
         |          |          |          |          |          | 
PLVDQMSGHH MNAQMTLPHH MGHPQAQLGY TDVGVPDVTE VHQNHHNMGM YQQQSGVPPV
                  
       250        260        270        280        290        300 
         |          |          |          |          |          | 
GAPPQGMMHQ GQGPPQMHQG HPGQHTPPSQ NPNSQSSGMP SPLYPWMRSQ FGKCQERKRG
                  
       310        320        330        340        350        360 
         |          |          |          |          |          | 
RQTYTRYQTL ELEKEFHFNR YLTRRRRIEI AHALCLTERQ IKIWFQNRRM KWKKENKTKG
                  
       370      378 
         |        |
EPGSGGEGDE ITPPNSPQ
                  
                  

P02833 in FASTA format

View entry in original SWISS-PROT format
View entry in raw text format (no links)
Report form for errors/updates in this SWISS-PROT entry


ISREC logo

Direct BLAST2 submission at EMBnet-CH (Lausanne, Switzerland)

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Direct BLAST submission at NCBI (Bethesda, USA)

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Tools

Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, Dotlet (Java) new

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